Welcome to Salmon & Sailfish’s documentation!

Contents:

• Requirements
• Installation
• Sailfish
  • Indexing
  • Quantification
  • References
• Salmon
  • Using Salmon
  • Alignment-based mode
  • Read-based mode
  • What’s this LIBTYPE?
  • Output
  • Misc
• Fragment Library Types

Indices and tables

• Index
• Module Index
• Search Page